HCSGD entry for LSP1
1. General information
| Official gene symbol | LSP1 |
|---|---|
| Entrez ID | 4046 |
| Gene full name | lymphocyte-specific protein 1 |
| Other gene symbols | WP34 pp52 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003779 | Actin binding | TAS | molecular_function |
| GO:0004871 | Signal transducer activity | IEA | molecular_function |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0006928 | Cellular component movement | TAS | biological_process |
| GO:0006968 | Cellular defense response | TAS | biological_process |
| GO:0015629 | Actin cytoskeleton | TAS | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8571277497 | 0.0954361118 | 0.9999902473 | 0.5887569252 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1393213274 |
| GSE13712_SHEAR | Up | 0.0459999063 |
| GSE13712_STATIC | Down | -0.0327684920 |
| GSE19018 | Up | 0.0414397442 |
| GSE19899_A1 | Down | -0.0785436412 |
| GSE19899_A2 | Up | 0.0100934401 |
| PubMed_21979375_A1 | Up | 0.0598119181 |
| PubMed_21979375_A2 | Down | -0.2224225888 |
| GSE35957 | Down | -2.0399259769 |
| GSE36640 | Up | 0.2472838018 |
| GSE54402 | Up | 0.0888592247 |
| GSE9593 | Down | -1.4914354993 |
| GSE43922 | Up | 0.1546352466 |
| GSE24585 | Up | 0.0646356136 |
| GSE37065 | Down | -0.5463191954 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Up | 0.4867943270 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018132 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
