HCSGD entry for APOBEC4

1. General information

Official gene symbolAPOBEC4
Entrez ID403314
Gene full nameapolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative)
Other gene symbolsC1orf169
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0006397MRNA processingIEAbiological_process
GO:0008270Zinc ion bindingIEAmolecular_function
GO:0016814Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidinesIEAmolecular_function
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.36466594350.92789078300.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0754664036
GSE13712_SHEARUp0.1746492723
GSE13712_STATICUp0.1400546100
GSE19018Down-0.0827892512
GSE19899_A1Up0.0942884423
GSE19899_A2Up0.1613788857
PubMed_21979375_A1Up0.2648257312
PubMed_21979375_A2Up0.0807609278
GSE35957Up0.0894882049
GSE36640Up0.2189160829
GSE54402Up0.0314761894
GSE9593Down-0.0077309254
GSE43922Up0.0158600504
GSE24585Up0.0301290233
GSE37065Down-0.0267738915
GSE28863_A1Up0.1290797466
GSE28863_A2Down-0.0586298520
GSE28863_A3Up0.1084406989
GSE28863_A4Up0.0506831875
GSE48662Up0.1248708748

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-335-5pMIMAT0000765MIRT016856MicroarrayFunctional MTI (Weak)18185580
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.