HCSGD entry for SNX30

1. General information

Official gene symbolSNX30
Entrez ID401548
Gene full namesorting nexin family member 30
Other gene symbolsATG24A
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005515Protein bindingIPImolecular_function
GO:0005737CytoplasmIEAcellular_component
GO:0007154Cell communicationIEAbiological_process
GO:0015031Protein transportIEAbiological_process
GO:0035091Phosphatidylinositol bindingIEAmolecular_function
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.38519942630.03562538660.99999024730.3572032675

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.8153448717
GSE13712_SHEARDown-0.6215142209
GSE13712_STATICUp0.1449295902
GSE19018Down-1.5759614702
GSE19899_A1Down-0.2207562204
GSE19899_A2Down-0.7404939730
PubMed_21979375_A1Down-0.6066706249
PubMed_21979375_A2Up0.5238575945
GSE35957Up0.2039111775
GSE36640Up0.0358822423
GSE54402Up0.2531473010
GSE9593Up0.5828163427
GSE43922Up0.1449042086
GSE24585Up0.0643024350
GSE37065Down-0.2023023245
GSE28863_A1Up0.3144156276
GSE28863_A2Up0.0774727360
GSE28863_A3Down-0.7986769582
GSE28863_A4Up0.1511136528
GSE48662Down-0.0422185985

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-21-5pMIMAT0000076MIRT030989MicroarrayFunctional MTI (Weak)18591254
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.