HCSGD entry for LECT2
1. General information
| Official gene symbol | LECT2 |
|---|---|
| Entrez ID | 3950 |
| Gene full name | leukocyte cell-derived chemotaxin 2 |
| Other gene symbols | chm-II chm2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001501 | Skeletal system development | TAS | biological_process |
| GO:0005615 | Extracellular space | TAS | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0006935 | Chemotaxis | IEA | biological_process |
| GO:0030178 | Negative regulation of Wnt signaling pathway | IEA | biological_process |
| GO:0042802 | Identical protein binding | IEA IPI | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3254560085 | 0.8580922305 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1391897814 |
| GSE13712_SHEAR | Down | -0.2085494598 |
| GSE13712_STATIC | Down | -0.1818642491 |
| GSE19018 | Up | 0.1543637607 |
| GSE19899_A1 | Up | 0.0785789938 |
| GSE19899_A2 | Up | 0.1206438431 |
| PubMed_21979375_A1 | Up | 0.3430715718 |
| PubMed_21979375_A2 | Up | 0.1193518920 |
| GSE35957 | Down | -0.0287337868 |
| GSE36640 | Up | 0.0651659547 |
| GSE54402 | Up | 1.1702656924 |
| GSE9593 | Up | 0.0113542910 |
| GSE43922 | Down | -0.0227969433 |
| GSE24585 | Down | -0.1674383554 |
| GSE37065 | Up | 0.0025575237 |
| GSE28863_A1 | Down | -0.0597614452 |
| GSE28863_A2 | Up | 0.1069253935 |
| GSE28863_A3 | Up | 0.2172700649 |
| GSE28863_A4 | Down | -0.0068975727 |
| GSE48662 | Down | -0.0166892375 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-let-7c-5p | MIMAT0000064 | MIRT051767 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
