HCSGD entry for ELFN1
1. General information
| Official gene symbol | ELFN1 |
|---|---|
| Entrez ID | 392617 |
| Gene full name | extracellular leucine-rich repeat and fibronectin type III domain containing 1 |
| Other gene symbols | PPP1R28 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004864 | Protein phosphatase inhibitor activity | IEA | molecular_function |
| GO:0010923 | Negative regulation of phosphatase activity | IDA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0019902 | Phosphatase binding | IDA | molecular_function |
| GO:0030425 | Dendrite | ISS | cellular_component |
| GO:0050808 | Synapse organization | ISS | biological_process |
| GO:0060076 | Excitatory synapse | ISS | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7119742031 | 0.0098528969 | 0.9999902473 | 0.1967663885 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1015452165 |
| GSE13712_SHEAR | Down | -1.2387561862 |
| GSE13712_STATIC | Down | -0.5019947483 |
| GSE19018 | Down | -0.6288757707 |
| GSE19899_A1 | Down | -0.3826744502 |
| GSE19899_A2 | Down | -0.5839484257 |
| PubMed_21979375_A1 | Down | -0.7008885731 |
| PubMed_21979375_A2 | Down | -0.6477416136 |
| GSE35957 | Up | 0.1394136073 |
| GSE36640 | Down | -0.5122570689 |
| GSE54402 | Down | -0.5311663678 |
| GSE9593 | Up | 0.4910915297 |
| GSE43922 | Down | -1.3276603503 |
| GSE24585 | Up | 0.1550372215 |
| GSE37065 | Down | -0.3993569738 |
| GSE28863_A1 | Up | 0.2407396401 |
| GSE28863_A2 | Up | 0.8523240905 |
| GSE28863_A3 | Down | -0.0319465382 |
| GSE28863_A4 | Down | -0.1487002503 |
| GSE48662 | Up | 0.3080766901 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
