HCSGD entry for NOTCH2NL
1. General information
| Official gene symbol | NOTCH2NL |
|---|---|
| Entrez ID | 388677 |
| Gene full name | notch 2 N-terminal like |
| Other gene symbols | N2N |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0005576 | Extracellular region | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0007219 | Notch signaling pathway | IEA | biological_process |
| GO:0007275 | Multicellular organismal development | IEA | biological_process |
| GO:0030154 | Cell differentiation | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0727635614 | 0.2598352912 | 0.5749379652 | 0.9778941807 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.3426012216 |
| GSE13712_SHEAR | Up | 0.8852895406 |
| GSE13712_STATIC | Up | 0.4013411825 |
| GSE19018 | Up | 0.4298263309 |
| GSE19899_A1 | Down | -0.1894674419 |
| GSE19899_A2 | Down | -0.2770246938 |
| PubMed_21979375_A1 | Down | -1.4068362169 |
| PubMed_21979375_A2 | Down | -0.2663515981 |
| GSE35957 | Down | -0.5318978262 |
| GSE36640 | Up | 0.2081644555 |
| GSE54402 | Up | 0.0350199747 |
| GSE9593 | Up | 0.0539059667 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | Up | 1.1043804548 |
| GSE28863_A2 | Up | 1.4048805473 |
| GSE28863_A3 | Up | 0.0579894251 |
| GSE28863_A4 | Down | -0.1567834760 |
| GSE48662 | Down | -0.0733852874 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-877-5p | MIMAT0004949 | MIRT037292 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
