HCSGD entry for TRABD2B
1. General information
| Official gene symbol | TRABD2B |
|---|---|
| Entrez ID | 388630 |
| Gene full name | TraB domain containing 2B |
| Other gene symbols | TIKI2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004222 | Metalloendopeptidase activity | IDA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005887 | Integral component of plasma membrane | IDA | cellular_component |
| GO:0006508 | Proteolysis | IEA | biological_process |
| GO:0008152 | Metabolic process | IDA | biological_process |
| GO:0016055 | Wnt signaling pathway | IEA | biological_process |
| GO:0017147 | Wnt-protein binding | IDA | molecular_function |
| GO:0018158 | Protein oxidation | IDA | biological_process |
| GO:0030178 | Negative regulation of Wnt signaling pathway | IDA | biological_process |
| GO:0031301 | Integral component of organelle membrane | IDA | cellular_component |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5908039018 | 0.9001325899 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0293478782 |
| GSE13712_SHEAR | Down | -0.1436064458 |
| GSE13712_STATIC | Up | 0.1023522113 |
| GSE19018 | Up | 0.1163188642 |
| GSE19899_A1 | Up | 0.1117933219 |
| GSE19899_A2 | Up | 0.1501748154 |
| PubMed_21979375_A1 | Down | -0.2087471695 |
| PubMed_21979375_A2 | Up | 0.0060815173 |
| GSE35957 | Up | 0.0425404646 |
| GSE36640 | Up | 0.0504336820 |
| GSE54402 | Down | -0.0629522545 |
| GSE9593 | Down | -0.0259475126 |
| GSE43922 | Up | 0.0929436121 |
| GSE24585 | Up | 0.0026126778 |
| GSE37065 | Up | 0.0370930648 |
| GSE28863_A1 | Down | -0.0553891458 |
| GSE28863_A2 | Up | 0.2500433587 |
| GSE28863_A3 | Up | 0.0962639906 |
| GSE28863_A4 | Up | 0.1519461388 |
| GSE48662 | Down | -0.0107790669 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
