HCSGD entry for TRNP1
1. General information
| Official gene symbol | TRNP1 |
|---|---|
| Entrez ID | 388610 |
| Gene full name | TMF1-regulated nuclear protein 1 |
| Other gene symbols | C1orf225 TNRP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | ISS | molecular_function |
| GO:0005634 | Nucleus | ISS | cellular_component |
| GO:0005719 | Nuclear euchromatin | ISS | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0007049 | Cell cycle | IEA | biological_process |
| GO:0021696 | Cerebellar cortex morphogenesis | ISS | biological_process |
| GO:0042127 | Regulation of cell proliferation | ISS | biological_process |
| GO:0051726 | Regulation of cell cycle | ISS | biological_process |
| GO:0061351 | Neural precursor cell proliferation | ISS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0030146423 | 0.8173715778 | 0.1477623836 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.7103391042 |
| GSE13712_SHEAR | Up | 0.5819444036 |
| GSE13712_STATIC | Up | 0.6879562839 |
| GSE19018 | Down | -0.4384921266 |
| GSE19899_A1 | Up | 0.7641191220 |
| GSE19899_A2 | Up | 1.0364274417 |
| PubMed_21979375_A1 | Up | 1.1752827499 |
| PubMed_21979375_A2 | Up | 0.5344204764 |
| GSE35957 | Up | 0.8227826414 |
| GSE36640 | Up | 1.4087734689 |
| GSE54402 | Up | 1.0445851004 |
| GSE9593 | Up | 0.6482255897 |
| GSE43922 | Up | 0.3452768297 |
| GSE24585 | Up | 0.0823662091 |
| GSE37065 | Down | -0.2643550030 |
| GSE28863_A1 | Down | -0.4863703787 |
| GSE28863_A2 | Down | -0.4093932662 |
| GSE28863_A3 | Down | -0.5943475558 |
| GSE28863_A4 | Down | -0.0889892580 |
| GSE48662 | Up | 0.2744802218 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
