HCSGD entry for ARF3
1. General information
| Official gene symbol | ARF3 |
|---|---|
| Entrez ID | 377 |
| Gene full name | ADP-ribosylation factor 3 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | TAS | cellular_component |
| GO:0003924 | GTPase activity | TAS | molecular_function |
| GO:0005525 | GTP binding | IEA | molecular_function |
| GO:0005622 | Intracellular | IEA | cellular_component |
| GO:0005794 | Golgi apparatus | IEA | cellular_component |
| GO:0006184 | GTP catabolic process | TAS | biological_process |
| GO:0006644 | Phospholipid metabolic process | TAS | biological_process |
| GO:0006661 | Phosphatidylinositol biosynthetic process | TAS | biological_process |
| GO:0007264 | Small GTPase mediated signal transduction | IEA | biological_process |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0016192 | Vesicle-mediated transport | IEA | biological_process |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
| GO:0048471 | Perinuclear region of cytoplasm | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1533569811 | 0.9250095627 | 0.7799638942 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3538335731 |
| GSE13712_SHEAR | Down | -0.0514460904 |
| GSE13712_STATIC | Down | -0.0425767099 |
| GSE19018 | Up | 0.1480692140 |
| GSE19899_A1 | Down | -0.0634116695 |
| GSE19899_A2 | Up | 0.9750250624 |
| PubMed_21979375_A1 | Up | 0.0761770261 |
| PubMed_21979375_A2 | Up | 0.2055804319 |
| GSE35957 | Down | -0.3017201110 |
| GSE36640 | Up | 0.2389696622 |
| GSE54402 | Up | 0.2585830487 |
| GSE9593 | Down | -0.0190365335 |
| GSE43922 | Up | 0.1728050627 |
| GSE24585 | Up | 0.0607808477 |
| GSE37065 | Up | 0.1306616120 |
| GSE28863_A1 | Down | -0.1287082540 |
| GSE28863_A2 | Up | 0.1771146805 |
| GSE28863_A3 | Down | -0.1319143863 |
| GSE28863_A4 | Down | -0.0027699000 |
| GSE48662 | Down | -0.0958709970 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | MIRT002742 | Microarray//Microarray;Other | Functional MTI (Weak) | 15685193 |
| hsa-miR-320a | MIMAT0000510 | MIRT044395 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-125b-5p | MIMAT0000423 | MIRT045938 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-10a-5p | MIMAT0000253 | MIRT047633 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-30c-5p | MIMAT0000244 | MIRT047965 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
- mirRecord
MicroRNA name | mirBase ID | Target site number | MiRNA mature ID | Test method inter | MiRNA regulation site | Reporter target site | Pubmed ID |
|---|---|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | NA | hsa-miR-1 | 15685193 |
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6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
