HCSGD entry for SWI5
1. General information
| Official gene symbol | SWI5 |
|---|---|
| Entrez ID | 375757 |
| Gene full name | SWI5 recombination repair homolog (yeast) |
| Other gene symbols | C9orf119 bA395P17.9 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000724 | Double-strand break repair via homologous recombination | IMP | biological_process |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | ISS | cellular_component |
| GO:0032798 | Swi5-Sfr1 complex | IDA | cellular_component |
| GO:0071479 | Cellular response to ionizing radiation | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1968633221 | 0.2162918202 | 0.8583246811 | 0.8958327301 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.4292034046 |
| GSE13712_SHEAR | Down | -0.1619629052 |
| GSE13712_STATIC | Down | -0.1297928069 |
| GSE19018 | Up | 0.1029498932 |
| GSE19899_A1 | Up | 0.2331459375 |
| GSE19899_A2 | Up | 0.2102534742 |
| PubMed_21979375_A1 | Up | 0.8401217737 |
| PubMed_21979375_A2 | Up | 0.4257718826 |
| GSE35957 | Down | -0.8850287397 |
| GSE36640 | Up | 0.3796631504 |
| GSE54402 | Up | 0.3848417007 |
| GSE9593 | Down | -0.4773888079 |
| GSE43922 | Up | 0.0525735366 |
| GSE24585 | Up | 0.2578153406 |
| GSE37065 | Down | -0.3625334535 |
| GSE28863_A1 | Down | -0.3250661637 |
| GSE28863_A2 | Down | -0.6315595438 |
| GSE28863_A3 | Down | -0.3671437103 |
| GSE28863_A4 | Up | 0.1265979122 |
| GSE48662 | Down | -0.0092281200 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
