HCSGD entry for IRF2BP2
1. General information
| Official gene symbol | IRF2BP2 |
|---|---|
| Entrez ID | 359948 |
| Gene full name | interferon regulatory factor 2 binding protein 2 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9840368147 | 0.0656907374 | 0.9999902473 | 0.4837845271 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2356532520 |
| GSE13712_SHEAR | Down | -0.0857186004 |
| GSE13712_STATIC | Down | -0.1375154781 |
| GSE19018 | Down | -0.0348581805 |
| GSE19899_A1 | Down | -0.0291293704 |
| GSE19899_A2 | Down | -0.1629664227 |
| PubMed_21979375_A1 | Down | -0.5580159034 |
| PubMed_21979375_A2 | Up | 0.0260181855 |
| GSE35957 | Down | -0.3188483728 |
| GSE36640 | Down | -0.6998635560 |
| GSE54402 | Down | -0.0884170254 |
| GSE9593 | Down | -0.1240129497 |
| GSE43922 | Up | 0.0004661181 |
| GSE24585 | Down | -0.0042359496 |
| GSE37065 | Down | -0.0805061752 |
| GSE28863_A1 | Down | -0.0704796262 |
| GSE28863_A2 | Down | -0.1440634502 |
| GSE28863_A3 | Up | 0.1524243846 |
| GSE28863_A4 | Down | -0.2268953930 |
| GSE48662 | Down | -0.2377243229 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-29c-3p | MIMAT0000681 | MIRT020363 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-103a-3p | MIMAT0000101 | MIRT027219 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT039969 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-320a | MIMAT0000510 | MIRT044718 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-186-5p | MIMAT0000456 | MIRT044960 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-222-3p | MIMAT0000279 | MIRT046677 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7c-5p | MIMAT0000064 | MIRT051858 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT052282 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
