HCSGD entry for IGSF1
1. General information
| Official gene symbol | IGSF1 |
|---|---|
| Entrez ID | 3547 |
| Gene full name | immunoglobulin superfamily, member 1 |
| Other gene symbols | CHTE IGCD1 IGDC1 INHBP PGSF2 p120 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004872 | Receptor activity | IDA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005576 | Extracellular region | IEA | cellular_component |
| GO:0006355 | Regulation of transcription, DNA-templated | IDA | biological_process |
| GO:0007165 | Signal transduction | IDA | biological_process |
| GO:0015026 | Coreceptor activity | IEA | molecular_function |
| GO:0016020 | Membrane | IDA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0034711 | Inhibin binding | IDA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4466361081 | 0.9363543140 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0132880343 |
| GSE13712_SHEAR | Down | -0.1546033877 |
| GSE13712_STATIC | Up | 0.0368483824 |
| GSE19018 | Up | 0.0792360662 |
| GSE19899_A1 | Up | 0.1675005510 |
| GSE19899_A2 | Up | 0.1611699233 |
| PubMed_21979375_A1 | Up | 0.1341195944 |
| PubMed_21979375_A2 | Up | 0.1086604237 |
| GSE35957 | Up | 0.1187176034 |
| GSE36640 | Up | 0.1144005618 |
| GSE54402 | Up | 0.0496101291 |
| GSE9593 | Up | 0.0960202031 |
| GSE43922 | Up | 0.0109719825 |
| GSE24585 | Up | 0.3004376874 |
| GSE37065 | Up | 0.1321962456 |
| GSE28863_A1 | Down | -0.0700959348 |
| GSE28863_A2 | Down | -0.0891299238 |
| GSE28863_A3 | Up | 0.1396333685 |
| GSE28863_A4 | Up | 0.0290223218 |
| GSE48662 | Down | -0.0637618968 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-425-5p | MIMAT0003393 | MIRT039303 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-577 | MIMAT0003242 | MIRT040516 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-148b-3p | MIMAT0000759 | MIRT043576 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-10b-5p | MIMAT0000254 | MIRT047415 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-10a-5p | MIMAT0000253 | MIRT047519 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049172 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT051138 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
