HCSGD entry for RSPH4A
1. General information
| Official gene symbol | RSPH4A |
|---|---|
| Entrez ID | 345895 |
| Gene full name | radial spoke head 4 homolog A (Chlamydomonas) |
| Other gene symbols | CILD11 RSHL3 RSPH6B dJ412I7.1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001534 | Radial spoke | ISS | cellular_component |
| GO:0003341 | Cilium movement | IMP | biological_process |
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005856 | Cytoskeleton | IEA | cellular_component |
| GO:0005930 | Axoneme | IC | cellular_component |
| GO:0031514 | Motile cilium | IC | cellular_component |
| GO:0035082 | Axoneme assembly | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2680120208 | 0.8804361650 | 0.9651586264 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0491445772 |
| GSE13712_SHEAR | Down | -0.1141060755 |
| GSE13712_STATIC | Up | 0.1511339353 |
| GSE19018 | Down | -0.1168342000 |
| GSE19899_A1 | Down | -0.0048465701 |
| GSE19899_A2 | Up | 0.1390231012 |
| PubMed_21979375_A1 | Down | -0.0362653590 |
| PubMed_21979375_A2 | Up | 0.1147991370 |
| GSE35957 | Up | 0.3718248644 |
| GSE36640 | Up | 0.1344574349 |
| GSE54402 | Up | 0.0389911421 |
| GSE9593 | Up | 0.2112576489 |
| GSE43922 | Up | 0.0126174828 |
| GSE24585 | Up | 0.8014316840 |
| GSE37065 | Up | 0.2391377721 |
| GSE28863_A1 | Down | -0.0091948052 |
| GSE28863_A2 | Up | 0.0280937885 |
| GSE28863_A3 | Up | 0.0465727126 |
| GSE28863_A4 | Down | -0.2173599032 |
| GSE48662 | Down | -0.0973891010 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017111 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
