HCSGD entry for ANKRD42
1. General information
| Official gene symbol | ANKRD42 |
|---|---|
| Entrez ID | 338699 |
| Gene full name | ankyrin repeat domain 42 |
| Other gene symbols | SARP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003735 | Structural constituent of ribosome | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005840 | Ribosome | IEA | cellular_component |
| GO:0006412 | Translation | IEA | biological_process |
| GO:0051059 | NF-kappaB binding | IEA | molecular_function |
| GO:0051092 | Positive regulation of NF-kappaB transcription factor activity | IEA | biological_process |
| GO:1900017 | Positive regulation of cytokine production involved in inflammatory response | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5483753201 | 0.6610298811 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | - | - |
| GSE13712_SHEAR | - | - |
| GSE13712_STATIC | - | - |
| GSE19018 | - | - |
| GSE19899_A1 | - | - |
| GSE19899_A2 | - | - |
| PubMed_21979375_A1 | - | - |
| PubMed_21979375_A2 | - | - |
| GSE35957 | - | - |
| GSE36640 | - | - |
| GSE54402 | - | - |
| GSE9593 | - | - |
| GSE43922 | Up | 0.8666801924 |
| GSE24585 | Up | 0.5142673503 |
| GSE37065 | Up | 0.1951477985 |
| GSE28863_A1 | Down | -0.1698767921 |
| GSE28863_A2 | Down | -0.2836655680 |
| GSE28863_A3 | Down | -0.4199951267 |
| GSE28863_A4 | Up | 0.0920783624 |
| GSE48662 | Down | -0.0132180724 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT022615 | Microarray | Functional MTI (Weak) | 18668037 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
