HCSGD entry for HSPA5
1. General information
| Official gene symbol | HSPA5 |
|---|---|
| Entrez ID | 3309 |
| Gene full name | heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) |
| Other gene symbols | BIP GRP78 MIF2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0002576 | Platelet degranulation | TAS | biological_process |
| GO:0005509 | Calcium ion binding | TAS | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005524 | ATP binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IMP | cellular_component |
| GO:0005783 | Endoplasmic reticulum | IDA IMP TAS | cellular_component |
| GO:0005788 | Endoplasmic reticulum lumen | TAS | cellular_component |
| GO:0005789 | Endoplasmic reticulum membrane | TAS | cellular_component |
| GO:0005793 | Endoplasmic reticulum-Golgi intermediate compartment | IDA | cellular_component |
| GO:0006200 | ATP catabolic process | ISS | biological_process |
| GO:0006983 | ER overload response | IEA | biological_process |
| GO:0006987 | Activation of signaling protein activity involved in unfolded protein response | TAS | biological_process |
| GO:0007596 | Blood coagulation | TAS | biological_process |
| GO:0008180 | COP9 signalosome | IDA | cellular_component |
| GO:0009986 | Cell surface | IEA | cellular_component |
| GO:0016887 | ATPase activity | ISS | molecular_function |
| GO:0019904 | Protein domain specific binding | IPI | molecular_function |
| GO:0021589 | Cerebellum structural organization | IEA | biological_process |
| GO:0021680 | Cerebellar Purkinje cell layer development | IEA | biological_process |
| GO:0030168 | Platelet activation | TAS | biological_process |
| GO:0030176 | Integral component of endoplasmic reticulum membrane | IDA | cellular_component |
| GO:0030433 | ER-associated ubiquitin-dependent protein catabolic process | TAS | biological_process |
| GO:0030496 | Midbody | IDA | cellular_component |
| GO:0030512 | Negative regulation of transforming growth factor beta receptor signaling pathway | IEA | biological_process |
| GO:0030968 | Endoplasmic reticulum unfolded protein response | TAS | biological_process |
| GO:0031398 | Positive regulation of protein ubiquitination | IEA | biological_process |
| GO:0031625 | Ubiquitin protein ligase binding | IPI | molecular_function |
| GO:0034663 | Endoplasmic reticulum chaperone complex | IDA | cellular_component |
| GO:0042149 | Cellular response to glucose starvation | IDA | biological_process |
| GO:0042470 | Melanosome | IEA | cellular_component |
| GO:0043022 | Ribosome binding | IEA | molecular_function |
| GO:0043066 | Negative regulation of apoptotic process | IMP TAS | biological_process |
| GO:0044267 | Cellular protein metabolic process | TAS | biological_process |
| GO:0051082 | Unfolded protein binding | TAS | molecular_function |
| GO:0051087 | Chaperone binding | TAS | molecular_function |
| GO:0051787 | Misfolded protein binding | IDA | molecular_function |
| GO:0060904 | Regulation of protein folding in endoplasmic reticulum | TAS | biological_process |
| GO:0071236 | Cellular response to antibiotic | IEA | biological_process |
| GO:0071353 | Cellular response to interleukin-4 | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7155504008 | 0.0570941188 | 0.9999902473 | 0.4488573178 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0691431365 |
| GSE13712_SHEAR | Down | -0.6832454891 |
| GSE13712_STATIC | Down | -0.2459444474 |
| GSE19018 | Down | -0.0662293643 |
| GSE19899_A1 | Down | -0.9510904869 |
| GSE19899_A2 | Down | -0.9576664798 |
| PubMed_21979375_A1 | Down | -1.0431644041 |
| PubMed_21979375_A2 | Down | -1.2568843216 |
| GSE35957 | Down | -0.1248933586 |
| GSE36640 | Down | -0.0299146494 |
| GSE54402 | Down | -0.0998491376 |
| GSE9593 | Up | 0.2131359554 |
| GSE43922 | Down | -0.0082158835 |
| GSE24585 | Up | 0.0884721014 |
| GSE37065 | Down | -0.0449851682 |
| GSE28863_A1 | Up | 0.1941543102 |
| GSE28863_A2 | Up | 0.8539606741 |
| GSE28863_A3 | Up | 0.1542165248 |
| GSE28863_A4 | Up | 0.0906013533 |
| GSE48662 | Up | 0.1634090490 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Name | Drug | Accession number |
|---|---|---|
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018562 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031900 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-93-3p | MIMAT0004509 | MIRT038848 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: 4 abstracts the gene occurs.
PubMed ID of the article | Sentenece the gene occurs |
|---|---|
| 26515130 | The UPR resulted in upregulation of ER chaperones including BIP/Grp78, Grp94 and led to an activation of IRE1alpha as evidenced by spliced XBP1 mRNA with IRE1alpha-induced JNK phosphorylation |
| 25552342 | The expression of GRP78 was seen in senescent BECs in PBC |
| 23634235 | Amongst the genes were IRAK3, SelS, HSPA5, HERPUD1, DNAJB9, SEPR1, C18orf55, ARF4, RINT1, NXT1, CADPS2, COG6, and GLRX5 |
| 22788682 | ER stress was detected by assays for glucose-regulated protein 78 (GRP78), CCAAT/enhancer-binding protein homologous protein (CHOP), and growth arrest and DNA damage-inducible protein 34 (GADD34) mRNA, and transient phosphorylation of eukaryotic translation initiation factor 2 alpha (eIF2alpha) |
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