HCSGD entry for HOXC10
1. General information
| Official gene symbol | HOXC10 |
|---|---|
| Entrez ID | 3226 |
| Gene full name | homeobox C10 |
| Other gene symbols | HOX3I |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001501 | Skeletal system development | IEA | biological_process |
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | IEA | molecular_function |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0008284 | Positive regulation of cell proliferation | TAS | biological_process |
| GO:0009952 | Anterior/posterior pattern specification | IEA | biological_process |
| GO:0009954 | Proximal/distal pattern formation | IEA | biological_process |
| GO:0019907 | Cyclin-dependent protein kinase activating kinase holoenzyme complex | IDA | cellular_component |
| GO:0021520 | Spinal cord motor neuron cell fate specification | IEA | biological_process |
| GO:0030326 | Embryonic limb morphogenesis | IEA | biological_process |
| GO:0043565 | Sequence-specific DNA binding | IEA | molecular_function |
| GO:0050905 | Neuromuscular process | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3624581551 | 0.3629855287 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1685296520 |
| GSE13712_SHEAR | Down | -0.1147161396 |
| GSE13712_STATIC | Down | -0.4552270649 |
| GSE19018 | Down | -0.0406249305 |
| GSE19899_A1 | Down | -0.0114588636 |
| GSE19899_A2 | Up | 0.0444524442 |
| PubMed_21979375_A1 | Up | 0.4418169942 |
| PubMed_21979375_A2 | Down | -0.0780277611 |
| GSE35957 | Up | 0.2325895041 |
| GSE36640 | Up | 0.0567660400 |
| GSE54402 | Up | 0.1852856026 |
| GSE9593 | Up | 0.0657281936 |
| GSE43922 | Up | 0.1029115297 |
| GSE24585 | Up | 0.1269466117 |
| GSE37065 | Down | -0.4288540734 |
| GSE28863_A1 | Down | -0.3466837988 |
| GSE28863_A2 | Down | -0.0717375647 |
| GSE28863_A3 | Up | 0.0408755922 |
| GSE28863_A4 | Down | -0.0288564571 |
| GSE48662 | Up | 0.5704635205 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-221-3p | MIMAT0000278 | MIRT024207 | qRT-PCR | Non-Functional MTI (Weak) | 20516212 |
| hsa-miR-103a-3p | MIMAT0000101 | MIRT027074 | Sequencing | Functional MTI (Weak) | 20371350 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
