HCSGD entry for HOXC9
1. General information
| Official gene symbol | HOXC9 |
|---|---|
| Entrez ID | 3225 |
| Gene full name | homeobox C9 |
| Other gene symbols | HOX3 HOX3B |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0009952 | Anterior/posterior pattern specification | IEA | biological_process |
| GO:0043565 | Sequence-specific DNA binding | IEA | molecular_function |
| GO:0048704 | Embryonic skeletal system morphogenesis | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3414859618 | 0.2014735686 | 0.9999902473 | 0.8682033071 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0726271913 |
| GSE13712_SHEAR | Down | -0.0713375888 |
| GSE13712_STATIC | Down | -0.0466393132 |
| GSE19018 | Up | 0.0033709831 |
| GSE19899_A1 | Up | 0.0126442083 |
| GSE19899_A2 | Up | 0.1818189868 |
| PubMed_21979375_A1 | Down | -0.0116561029 |
| PubMed_21979375_A2 | Up | 0.1918737846 |
| GSE35957 | Down | -0.6981871833 |
| GSE36640 | Down | -0.8661018873 |
| GSE54402 | Down | -0.1286966542 |
| GSE9593 | Down | -0.0863203388 |
| GSE43922 | Up | 0.0259750637 |
| GSE24585 | Up | 1.6085219002 |
| GSE37065 | Down | -0.1818448972 |
| GSE28863_A1 | Down | -0.5450636200 |
| GSE28863_A2 | Down | -0.2880483115 |
| GSE28863_A3 | Up | 0.0589889813 |
| GSE28863_A4 | Up | 0.0900118284 |
| GSE48662 | Up | 0.4811566112 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT023072 | Microarray | Functional MTI (Weak) | 18668037 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
