HCSGD entry for HNRNPAB
1. General information
| Official gene symbol | HNRNPAB |
|---|---|
| Entrez ID | 3182 |
| Gene full name | heterogeneous nuclear ribonucleoprotein A/B |
| Other gene symbols | ABBP1 HNRPAB |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000166 | Nucleotide binding | IEA | molecular_function |
| GO:0001837 | Epithelial to mesenchymal transition | ISS | biological_process |
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | ISS | molecular_function |
| GO:0003723 | RNA binding | TAS | molecular_function |
| GO:0003729 | MRNA binding | TAS | molecular_function |
| GO:0005634 | Nucleus | IDA ISS | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | ISS | cellular_component |
| GO:0030529 | Ribonucleoprotein complex | IDA | cellular_component |
| GO:0043565 | Sequence-specific DNA binding | ISS | molecular_function |
| GO:0045893 | Positive regulation of transcription, DNA-templated | ISS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7568096767 | 0.0463003229 | 0.9999902473 | 0.4038007952 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2255475726 |
| GSE13712_SHEAR | Down | -0.0304141594 |
| GSE13712_STATIC | Down | -0.0743966416 |
| GSE19018 | Down | -1.5259637376 |
| GSE19899_A1 | Down | -0.4070008693 |
| GSE19899_A2 | Down | -0.2121968218 |
| PubMed_21979375_A1 | Down | -0.3885599969 |
| PubMed_21979375_A2 | Down | -0.2941904344 |
| GSE35957 | Down | -0.6231608494 |
| GSE36640 | Down | -0.8193992873 |
| GSE54402 | Up | 0.2010124397 |
| GSE9593 | Down | -0.4516387702 |
| GSE43922 | Up | 0.0370181712 |
| GSE24585 | Down | -0.1216943887 |
| GSE37065 | Down | -0.1780567194 |
| GSE28863_A1 | Up | 0.1235504209 |
| GSE28863_A2 | Up | 0.1467492967 |
| GSE28863_A3 | Up | 0.5467892436 |
| GSE28863_A4 | Down | -0.0320955206 |
| GSE48662 | Up | 0.1018855933 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1260a | MIMAT0005911 | MIRT035853 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT039743 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-504-5p | MIMAT0002875 | MIRT041080 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-193b-3p | MIMAT0002819 | MIRT041499 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-149-5p | MIMAT0000450 | MIRT045420 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-181a-5p | MIMAT0000256 | MIRT047321 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
