HCSGD entry for H3F3A
1. General information
| Official gene symbol | H3F3A |
|---|---|
| Entrez ID | 3020 |
| Gene full name | H3 histone, family 3A |
| Other gene symbols | H3.3A H3F3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000786 | Nucleosome | IEA | cellular_component |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005576 | Extracellular region | TAS | cellular_component |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005654 | Nucleoplasm | TAS | cellular_component |
| GO:0006334 | Nucleosome assembly | IEA | biological_process |
| GO:0007596 | Blood coagulation | TAS | biological_process |
| GO:0046982 | Protein heterodimerization activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6764414802 | 0.0432688804 | 0.9999902473 | 0.3916369326 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2768314172 |
| GSE13712_SHEAR | Down | -0.9069843096 |
| GSE13712_STATIC | Down | -0.9218525313 |
| GSE19018 | Up | 0.0342629103 |
| GSE19899_A1 | Up | 0.3086610650 |
| GSE19899_A2 | Up | 0.1854792425 |
| PubMed_21979375_A1 | Down | -1.5509525870 |
| PubMed_21979375_A2 | Down | -0.6580108952 |
| GSE35957 | Up | 0.1681967453 |
| GSE36640 | Down | -0.6512297941 |
| GSE54402 | Down | -0.0504419682 |
| GSE9593 | Down | -0.5843993453 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | Up | 0.2766118173 |
| GSE28863_A2 | Down | -0.0497803159 |
| GSE28863_A3 | Up | 0.1949443013 |
| GSE28863_A4 | Up | 0.2920875524 |
| GSE48662 | Down | -0.1169232558 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-34a-5p | MIMAT0000255 | MIRT025401 | Proteomics | Functional MTI (Weak) | 21566225 |
| hsa-miR-34a-5p | MIMAT0000255 | MIRT025401 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-100-5p | MIMAT0000098 | MIRT048417 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
