HCSGD entry for HIST1H1B
1. General information
| Official gene symbol | HIST1H1B |
|---|---|
| Entrez ID | 3009 |
| Gene full name | histone cluster 1, H1b |
| Other gene symbols | H1 H1.5 H1B H1F5 H1s-3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000786 | Nucleosome | IEA | cellular_component |
| GO:0000790 | Nuclear chromatin | IDA | cellular_component |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0006334 | Nucleosome assembly | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9199876107 | 0.0017196839 | 0.9999902473 | 0.0794414035 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0038787065 |
| GSE13712_SHEAR | Up | 0.0435645927 |
| GSE13712_STATIC | Down | -0.0400008141 |
| GSE19018 | Up | 0.1216118115 |
| GSE19899_A1 | Down | -0.0794408156 |
| GSE19899_A2 | Down | -0.0850580518 |
| PubMed_21979375_A1 | Down | -0.8935139582 |
| PubMed_21979375_A2 | Down | -0.0201118541 |
| GSE35957 | Up | 0.1829577184 |
| GSE36640 | Down | -2.9270876662 |
| GSE54402 | Down | -0.4079685194 |
| GSE9593 | Down | -0.1160565396 |
| GSE43922 | Down | -3.3525453994 |
| GSE24585 | Down | -0.0429167722 |
| GSE37065 | Down | -1.1839403594 |
| GSE28863_A1 | Down | -0.5801836295 |
| GSE28863_A2 | Up | 1.1544730249 |
| GSE28863_A3 | Down | -0.1552077482 |
| GSE28863_A4 | Down | -0.7005491018 |
| GSE48662 | Down | -1.6832371512 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | MIRT023593 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-34a-5p | MIMAT0000255 | MIRT025285 | Proteomics | Functional MTI (Weak) | 21566225 |
| hsa-miR-193b-3p | MIMAT0002819 | MIRT041257 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-3615 | MIMAT0017994 | MIRT052852 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
