HCSGD entry for HIST1H1D
1. General information
| Official gene symbol | HIST1H1D |
|---|---|
| Entrez ID | 3007 |
| Gene full name | histone cluster 1, H1d |
| Other gene symbols | H1.3 H1D H1F3 H1s-2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000786 | Nucleosome | IEA | cellular_component |
| GO:0000790 | Nuclear chromatin | IDA | cellular_component |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0006334 | Nucleosome assembly | IEA | biological_process |
| GO:0016584 | Nucleosome positioning | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5398590593 | 0.0075598078 | 0.9999902473 | 0.1736590750 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2204500049 |
| GSE13712_SHEAR | Up | 0.0376937830 |
| GSE13712_STATIC | Up | 0.1748066169 |
| GSE19018 | Up | 0.0314530304 |
| GSE19899_A1 | Up | 0.0507390585 |
| GSE19899_A2 | Down | -0.0177194295 |
| PubMed_21979375_A1 | Down | -1.0429714172 |
| PubMed_21979375_A2 | Up | 0.0641668109 |
| GSE35957 | Up | 0.4809553198 |
| GSE36640 | Down | -4.7659259303 |
| GSE54402 | Down | -0.7625883454 |
| GSE9593 | Up | 0.1780187599 |
| GSE43922 | Down | -0.9848250946 |
| GSE24585 | Down | -0.9347429065 |
| GSE37065 | Down | -0.0696548215 |
| GSE28863_A1 | Up | 0.2686707865 |
| GSE28863_A2 | Up | 0.8052682261 |
| GSE28863_A3 | Down | -1.1186212578 |
| GSE28863_A4 | Down | -0.2953320299 |
| GSE48662 | Up | 0.4341885421 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-193b-3p | MIMAT0002819 | MIRT016545 | Microarray | Functional MTI (Weak) | 20304954 |
| hsa-miR-34a-5p | MIMAT0000255 | MIRT025402 | Proteomics | Functional MTI (Weak) | 21566225 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT030222 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-let-7a-5p | MIMAT0000062 | MIRT052415 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
