HCSGD entry for RAX
1. General information
| Official gene symbol | RAX |
|---|---|
| Entrez ID | 30062 |
| Gene full name | retina and anterior neural fold homeobox |
| Other gene symbols | MCOP3 RX |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0007389 | Pattern specification process | IEA | biological_process |
| GO:0007601 | Visual perception | TAS | biological_process |
| GO:0021854 | Hypothalamus development | IEA | biological_process |
| GO:0043010 | Camera-type eye development | IEA | biological_process |
| GO:0043565 | Sequence-specific DNA binding | IEA | molecular_function |
| GO:0060173 | Limb development | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7861532958 | 0.6911349455 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0582585495 |
| GSE13712_SHEAR | Up | 0.0671210509 |
| GSE13712_STATIC | Down | -0.2475062343 |
| GSE19018 | Up | 0.0920442469 |
| GSE19899_A1 | Down | -0.1838421826 |
| GSE19899_A2 | Up | 0.0312550038 |
| PubMed_21979375_A1 | Down | -0.0035751754 |
| PubMed_21979375_A2 | Down | -0.1112124580 |
| GSE35957 | Up | 0.1955986218 |
| GSE36640 | Up | 0.0635571308 |
| GSE54402 | Down | -0.0253136398 |
| GSE9593 | Down | -0.0307132036 |
| GSE43922 | Up | 0.2379560099 |
| GSE24585 | Up | 0.2101916688 |
| GSE37065 | Down | -0.1440603929 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Down | -0.0829529415 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-29b-3p | MIMAT0000100 | MIRT007011 | Luciferase reporter assay//Western blot | Functional MTI | 21897745 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
