HCSGD entry for STRN3
1. General information
| Official gene symbol | STRN3 |
|---|---|
| Entrez ID | 29966 |
| Gene full name | striatin, calmodulin binding protein 3 |
| Other gene symbols | SG2NA |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000122 | Negative regulation of transcription from RNA polymerase II promoter | IDA | biological_process |
| GO:0000159 | Protein phosphatase type 2A complex | IDA | cellular_component |
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | IDA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005516 | Calmodulin binding | NAS | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005654 | Nucleoplasm | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA IEA | cellular_component |
| GO:0005794 | Golgi apparatus | IDA | cellular_component |
| GO:0005886 | Plasma membrane | IDA | cellular_component |
| GO:0030425 | Dendrite | IEA ISS | cellular_component |
| GO:0032355 | Response to estradiol | IEA ISS | biological_process |
| GO:0032403 | Protein complex binding | IDA IEA | molecular_function |
| GO:0033147 | Negative regulation of intracellular estrogen receptor signaling pathway | IEA ISS | biological_process |
| GO:0043025 | Neuronal cell body | IEA ISS | cellular_component |
| GO:0043234 | Protein complex | IEA ISS | cellular_component |
| GO:0045892 | Negative regulation of transcription, DNA-templated | IDA IEA | biological_process |
| GO:0045944 | Positive regulation of transcription from RNA polymerase II promoter | IDA | biological_process |
| GO:0051721 | Protein phosphatase 2A binding | IDA | molecular_function |
| GO:0070016 | Armadillo repeat domain binding | IPI | molecular_function |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6308630143 | 0.0764340641 | 0.9999902473 | 0.5224152168 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1848443594 |
| GSE13712_SHEAR | Down | -0.8806976615 |
| GSE13712_STATIC | Down | -0.6876365979 |
| GSE19018 | Up | 0.0528961116 |
| GSE19899_A1 | Down | -0.1997220525 |
| GSE19899_A2 | Down | -0.4056415197 |
| PubMed_21979375_A1 | Up | 0.2951708350 |
| PubMed_21979375_A2 | Down | -0.4075316803 |
| GSE35957 | Up | 0.5207113670 |
| GSE36640 | Up | 0.4232262587 |
| GSE54402 | Up | 0.0527154764 |
| GSE9593 | Down | -0.0521749036 |
| GSE43922 | Down | -0.2682698043 |
| GSE24585 | Up | 0.5461745443 |
| GSE37065 | Down | -0.0095708400 |
| GSE28863_A1 | Down | -0.0467648472 |
| GSE28863_A2 | Down | -0.1637838037 |
| GSE28863_A3 | Down | -0.6497155255 |
| GSE28863_A4 | Up | 0.1418687221 |
| GSE48662 | Up | 0.2644480420 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-125b-5p | MIMAT0000423 | MIRT045977 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
