HCSGD entry for DSE
1. General information
| Official gene symbol | DSE |
|---|---|
| Entrez ID | 29940 |
| Gene full name | dermatan sulfate epimerase |
| Other gene symbols | DSEP DSEPI SART-2 SART2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | TAS | cellular_component |
| GO:0005783 | Endoplasmic reticulum | IDA | cellular_component |
| GO:0005794 | Golgi apparatus | IDA | cellular_component |
| GO:0005975 | Carbohydrate metabolic process | TAS | biological_process |
| GO:0015012 | Heparan sulfate proteoglycan biosynthetic process | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0030203 | Glycosaminoglycan metabolic process | TAS | biological_process |
| GO:0030204 | Chondroitin sulfate metabolic process | TAS | biological_process |
| GO:0030206 | Chondroitin sulfate biosynthetic process | IEA | biological_process |
| GO:0030208 | Dermatan sulfate biosynthetic process | IDA TAS | biological_process |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
| GO:0047757 | Chondroitin-glucuronate 5-epimerase activity | IDA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4848438585 | 0.7082681167 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2238813353 |
| GSE13712_SHEAR | Up | 0.0879950099 |
| GSE13712_STATIC | Up | 0.2538554915 |
| GSE19018 | Up | 0.2569636135 |
| GSE19899_A1 | Up | 0.0583154793 |
| GSE19899_A2 | Down | -0.0115265017 |
| PubMed_21979375_A1 | Down | -0.1079161491 |
| PubMed_21979375_A2 | Up | 0.1798576375 |
| GSE35957 | Up | 0.1845735170 |
| GSE36640 | Down | -0.3840899724 |
| GSE54402 | Down | -0.0527015699 |
| GSE9593 | Up | 0.1604542318 |
| GSE43922 | Up | 0.1274134591 |
| GSE24585 | Down | -0.0340465521 |
| GSE37065 | Down | -0.1439467326 |
| GSE28863_A1 | Down | -0.0839731891 |
| GSE28863_A2 | Up | 0.0695037836 |
| GSE28863_A3 | Up | 0.0340780826 |
| GSE28863_A4 | Down | -0.1197816455 |
| GSE48662 | Up | 0.6391185091 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-21-5p | MIMAT0000076 | MIRT030964 | Microarray | Functional MTI (Weak) | 18591254 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
