HCSGD entry for RPA4
1. General information
| Official gene symbol | RPA4 |
|---|---|
| Entrez ID | 29935 |
| Gene full name | replication protein A4, 30kDa |
| Other gene symbols | HSU24186 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000077 | DNA damage checkpoint | IDA | biological_process |
| GO:0000082 | G1/S transition of mitotic cell cycle | TAS | biological_process |
| GO:0000278 | Mitotic cell cycle | TAS | biological_process |
| GO:0003697 | Single-stranded DNA binding | TAS | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005654 | Nucleoplasm | TAS | cellular_component |
| GO:0005662 | DNA replication factor A complex | IDA | cellular_component |
| GO:0006270 | DNA replication initiation | TAS | biological_process |
| GO:0006289 | Nucleotide-excision repair | IDA | biological_process |
| GO:0033260 | Nuclear cell cycle DNA replication | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2742412674 | 0.7919910756 | 0.9705544404 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0139075191 |
| GSE13712_SHEAR | Up | 0.2280750984 |
| GSE13712_STATIC | Up | 0.4311030776 |
| GSE19018 | Up | 0.2374709864 |
| GSE19899_A1 | Up | 0.0340779872 |
| GSE19899_A2 | Up | 0.4160447823 |
| PubMed_21979375_A1 | Up | 0.3441029393 |
| PubMed_21979375_A2 | Up | 0.1023739564 |
| GSE35957 | Down | -0.2317675018 |
| GSE36640 | Up | 0.0232765360 |
| GSE54402 | Down | -0.0315596179 |
| GSE9593 | Down | -0.1328859310 |
| GSE43922 | Up | 0.0157579192 |
| GSE24585 | Down | -0.2013256862 |
| GSE37065 | Up | 0.1302596660 |
| GSE28863_A1 | Up | 0.0573232001 |
| GSE28863_A2 | Down | -0.0349797047 |
| GSE28863_A3 | Up | 0.1808755845 |
| GSE28863_A4 | Up | 0.0626487395 |
| GSE48662 | Down | -0.3005524625 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
