HCSGD entry for SNX11
1. General information
| Official gene symbol | SNX11 |
|---|---|
| Entrez ID | 29916 |
| Gene full name | sorting nexin 11 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005768 | Endosome | IDA | cellular_component |
| GO:0007154 | Cell communication | IEA | biological_process |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0016050 | Vesicle organization | IMP | biological_process |
| GO:0035091 | Phosphatidylinositol binding | IEA | molecular_function |
| GO:1901981 | Phosphatidylinositol phosphate binding | IDA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1372812051 | 0.7515298621 | 0.7466585210 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2360245910 |
| GSE13712_SHEAR | Up | 0.2567475941 |
| GSE13712_STATIC | Up | 0.4327917780 |
| GSE19018 | Down | -0.2228832504 |
| GSE19899_A1 | Up | 0.0850407231 |
| GSE19899_A2 | Up | 0.3511893643 |
| PubMed_21979375_A1 | Up | 1.1200786701 |
| PubMed_21979375_A2 | Up | 0.4249424784 |
| GSE35957 | Up | 0.0144927273 |
| GSE36640 | Up | 0.5305011625 |
| GSE54402 | Up | 0.1654738884 |
| GSE9593 | Up | 0.1152975484 |
| GSE43922 | Up | 0.0509508473 |
| GSE24585 | Up | 0.3300254161 |
| GSE37065 | Up | 0.0680410049 |
| GSE28863_A1 | Down | -0.3664716291 |
| GSE28863_A2 | Down | -0.2063064437 |
| GSE28863_A3 | Down | -0.5554172640 |
| GSE28863_A4 | Up | 0.0484544789 |
| GSE48662 | Up | 0.1052340540 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-151a-5p | MIMAT0004697 | MIRT038195 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-484 | MIMAT0002174 | MIRT042365 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-128-3p | MIMAT0000424 | MIRT045867 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
