HCSGD entry for PSMC3IP
1. General information
| Official gene symbol | PSMC3IP |
|---|---|
| Entrez ID | 29893 |
| Gene full name | PSMC3 interacting protein |
| Other gene symbols | GT198 HOP2 HUMGT198A ODG3 TBPIP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005575 | Cellular_component | ND | cellular_component |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006310 | DNA recombination | IEA | biological_process |
| GO:0007126 | Meiosis | IEA | biological_process |
| GO:0030374 | Ligand-dependent nuclear receptor transcription coactivator activity | IMP | molecular_function |
| GO:2001141 | Regulation of RNA biosynthetic process | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8973628965 | 0.0022643289 | 0.9999902473 | 0.0915505376 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1502277144 |
| GSE13712_SHEAR | Up | 0.1898237008 |
| GSE13712_STATIC | Down | -0.2398703124 |
| GSE19018 | Down | -0.8606913703 |
| GSE19899_A1 | Down | -0.3975629101 |
| GSE19899_A2 | Down | -1.8495475840 |
| PubMed_21979375_A1 | Down | -0.5878951937 |
| PubMed_21979375_A2 | Down | -2.4502612546 |
| GSE35957 | Down | -1.4766245479 |
| GSE36640 | Down | -1.2653479238 |
| GSE54402 | Up | 0.0036696360 |
| GSE9593 | Down | -0.7697516889 |
| GSE43922 | Down | -0.5086915119 |
| GSE24585 | Up | 0.5687883001 |
| GSE37065 | Down | -0.1575881531 |
| GSE28863_A1 | Down | -0.4541823303 |
| GSE28863_A2 | Up | 0.3534163279 |
| GSE28863_A3 | Up | 0.2684878394 |
| GSE28863_A4 | Up | 0.2648220077 |
| GSE48662 | Down | -1.2943210600 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-193b-3p | MIMAT0002819 | MIRT016392 | Microarray | Functional MTI (Weak) | 20304954 |
| hsa-miR-215-5p | MIMAT0000272 | MIRT024674 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026333 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-484 | MIMAT0002174 | MIRT042239 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
