HCSGD entry for TFCP2L1
1. General information
| Official gene symbol | TFCP2L1 |
|---|---|
| Entrez ID | 29842 |
| Gene full name | transcription factor CP2-like 1 |
| Other gene symbols | CRTR1 LBP-9 LBP9 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000122 | Negative regulation of transcription from RNA polymerase II promoter | IEA | biological_process |
| GO:0000902 | Cell morphogenesis | IEA | biological_process |
| GO:0002070 | Epithelial cell maturation | IEA | biological_process |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | TAS | molecular_function |
| GO:0003714 | Transcription corepressor activity | TAS | molecular_function |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005739 | Mitochondrion | IDA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006357 | Regulation of transcription from RNA polymerase II promoter | TAS | biological_process |
| GO:0006694 | Steroid biosynthetic process | TAS | biological_process |
| GO:0007028 | Cytoplasm organization | IEA | biological_process |
| GO:0007431 | Salivary gland development | IEA | biological_process |
| GO:0007565 | Female pregnancy | TAS | biological_process |
| GO:0008340 | Determination of adult lifespan | IEA | biological_process |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0045927 | Positive regulation of growth | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6424415220 | 0.9190098249 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0050182534 |
| GSE13712_SHEAR | Up | 0.0926016925 |
| GSE13712_STATIC | Up | 0.0460418603 |
| GSE19018 | Up | 0.0736080863 |
| GSE19899_A1 | Down | -0.0035670487 |
| GSE19899_A2 | Up | 0.0643545055 |
| PubMed_21979375_A1 | Up | 0.0186211370 |
| PubMed_21979375_A2 | Down | -0.1549830211 |
| GSE35957 | Up | 0.0230905026 |
| GSE36640 | Up | 0.0039664456 |
| GSE54402 | Up | 0.1295460139 |
| GSE9593 | Down | -0.0447655563 |
| GSE43922 | Up | 0.0231708843 |
| GSE24585 | Up | 0.1342367409 |
| GSE37065 | Down | -0.0892032477 |
| GSE28863_A1 | Up | 0.0141498260 |
| GSE28863_A2 | Up | 0.0600505164 |
| GSE28863_A3 | Up | 0.2849153499 |
| GSE28863_A4 | Up | 0.2006822829 |
| GSE48662 | Down | -0.0338379772 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-215-5p | MIMAT0000272 | MIRT024786 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026438 | Microarray | Functional MTI (Weak) | 19074876 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
