HCSGD entry for DDX25
1. General information
| Official gene symbol | DDX25 |
|---|---|
| Entrez ID | 29118 |
| Gene full name | DEAD (Asp-Glu-Ala-Asp) box helicase 25 |
| Other gene symbols | GRTH |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0004004 | ATP-dependent RNA helicase activity | ISS | molecular_function |
| GO:0004386 | Helicase activity | IEA | molecular_function |
| GO:0005524 | ATP binding | IEA ISS | molecular_function |
| GO:0005634 | Nucleus | ISS | cellular_component |
| GO:0005737 | Cytoplasm | ISS | cellular_component |
| GO:0006200 | ATP catabolic process | ISS | biological_process |
| GO:0006406 | MRNA export from nucleus | ISS | biological_process |
| GO:0006417 | Regulation of translation | ISS | biological_process |
| GO:0007275 | Multicellular organismal development | IEA | biological_process |
| GO:0007286 | Spermatid development | ISS | biological_process |
| GO:0008026 | ATP-dependent helicase activity | IEA | molecular_function |
| GO:0033391 | Chromatoid body | ISS | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4206374758 | 0.9320925953 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0834592300 |
| GSE13712_SHEAR | Down | -0.1218713265 |
| GSE13712_STATIC | Up | 0.2950680810 |
| GSE19018 | Up | 0.0127796508 |
| GSE19899_A1 | Up | 0.0068895446 |
| GSE19899_A2 | Up | 0.1608813540 |
| PubMed_21979375_A1 | Up | 0.2373108504 |
| PubMed_21979375_A2 | Down | -0.0557761749 |
| GSE35957 | Up | 0.1396621149 |
| GSE36640 | Down | -0.1230303478 |
| GSE54402 | Down | -0.0014066549 |
| GSE9593 | Up | 0.0744965236 |
| GSE43922 | Up | 0.0475308276 |
| GSE24585 | Up | 0.2123694707 |
| GSE37065 | Up | 0.0074503604 |
| GSE28863_A1 | Down | -0.0170596960 |
| GSE28863_A2 | Down | -0.1042843559 |
| GSE28863_A3 | Up | 0.2873952631 |
| GSE28863_A4 | Up | 0.1785723084 |
| GSE48662 | Down | -0.0684673959 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029791 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
