HCSGD entry for CCDC113
1. General information
| Official gene symbol | CCDC113 |
|---|---|
| Entrez ID | 29070 |
| Gene full name | coiled-coil domain containing 113 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0043234 | Protein complex | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0463135747 | 0.1911337905 | 0.4772981989 | 0.8480836986 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3832838120 |
| GSE13712_SHEAR | Down | -0.0587841516 |
| GSE13712_STATIC | Up | 0.0166901204 |
| GSE19018 | Down | -0.1663861770 |
| GSE19899_A1 | Down | -0.0522079070 |
| GSE19899_A2 | Down | -0.7743119856 |
| PubMed_21979375_A1 | Down | -1.1774806845 |
| PubMed_21979375_A2 | Up | 0.4596543893 |
| GSE35957 | Down | -0.6687475709 |
| GSE36640 | Up | 2.5521371119 |
| GSE54402 | Down | -0.2086926220 |
| GSE9593 | Up | 0.9867317447 |
| GSE43922 | Down | -0.6470116699 |
| GSE24585 | Up | 1.1250247563 |
| GSE37065 | Down | -0.0694751656 |
| GSE28863_A1 | Down | -0.0763050022 |
| GSE28863_A2 | Up | 0.3160215975 |
| GSE28863_A3 | Down | -0.1668930599 |
| GSE28863_A4 | Up | 0.1777176706 |
| GSE48662 | Down | -0.0858892014 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-32-5p | MIMAT0000090 | MIRT028268 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-22-5p | MIMAT0004495 | MIRT038959 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7e-5p | MIMAT0000066 | MIRT051698 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
