HCSGD entry for ATAD2
1. General information
| Official gene symbol | ATAD2 |
|---|---|
| Entrez ID | 29028 |
| Gene full name | ATPase family, AAA domain containing 2 |
| Other gene symbols | ANCCA PRO2000 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005524 | ATP binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0016887 | ATPase activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6230449717 | 0.0007394248 | 0.9999902473 | 0.0512818421 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.8709279964 |
| GSE13712_SHEAR | Up | 0.1280773387 |
| GSE13712_STATIC | Down | -0.1154330655 |
| GSE19018 | Down | -0.1200069593 |
| GSE19899_A1 | Down | -1.0930203543 |
| GSE19899_A2 | Down | -2.5375559348 |
| PubMed_21979375_A1 | Down | -0.6729813352 |
| PubMed_21979375_A2 | Down | -2.3980179399 |
| GSE35957 | Down | -1.6983454090 |
| GSE36640 | Down | -3.2876152802 |
| GSE54402 | Down | -0.0958530308 |
| GSE9593 | Down | -1.6091353607 |
| GSE43922 | Down | -0.9376263149 |
| GSE24585 | Up | 0.3563622444 |
| GSE37065 | Down | -0.3908055253 |
| GSE28863_A1 | Up | 0.5781352626 |
| GSE28863_A2 | Up | 1.2828712278 |
| GSE28863_A3 | Up | 0.0822081342 |
| GSE28863_A4 | Up | 0.2676741870 |
| GSE48662 | Down | -1.4237318513 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-106b-5p | MIMAT0000680 | MIRT020472 | Microarray | Functional MTI (Weak) | 17242205 |
| hsa-miR-215-5p | MIMAT0000272 | MIRT024263 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026860 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-941 | MIMAT0004984 | MIRT036581 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-193b-3p | MIMAT0002819 | MIRT041465 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-17-3p | MIMAT0000071 | MIRT050753 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
