HCSGD entry for WDR62
1. General information
| Official gene symbol | WDR62 |
|---|---|
| Entrez ID | 284403 |
| Gene full name | WD repeat domain 62 |
| Other gene symbols | C19orf14 MCPH2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000922 | Spindle pole | IDA | cellular_component |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0021987 | Cerebral cortex development | IMP | biological_process |
| GO:0022008 | Neurogenesis | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8884533414 | 0.3179124045 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1133686370 |
| GSE13712_SHEAR | Up | 0.1277642411 |
| GSE13712_STATIC | Down | -0.0934956185 |
| GSE19018 | Up | 0.2216568539 |
| GSE19899_A1 | Down | -0.0502401311 |
| GSE19899_A2 | Up | 0.0489757748 |
| PubMed_21979375_A1 | Up | 0.0330317862 |
| PubMed_21979375_A2 | Down | -0.4045568858 |
| GSE35957 | Up | 0.1781862169 |
| GSE36640 | Down | -0.1183299545 |
| GSE54402 | Up | 0.0448516481 |
| GSE9593 | Up | 0.0455571936 |
| GSE43922 | Down | -0.0437398391 |
| GSE24585 | Down | -0.1497537673 |
| GSE37065 | Down | -0.0697158071 |
| GSE28863_A1 | Down | -0.0585570392 |
| GSE28863_A2 | Up | 0.0617983954 |
| GSE28863_A3 | Up | 0.1026627639 |
| GSE28863_A4 | Up | 0.1254331832 |
| GSE48662 | Down | -0.7550706066 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-193b-3p | MIMAT0002819 | MIRT016504 | Microarray | Functional MTI (Weak) | 20304954 |
| hsa-miR-877-3p | MIMAT0004950 | MIRT037077 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-769-5p | MIMAT0003886 | MIRT039175 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-542-5p | MIMAT0003340 | MIRT039350 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT040399 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-186-5p | MIMAT0000456 | MIRT045108 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-149-5p | MIMAT0000450 | MIRT045652 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-1260b | MIMAT0015041 | MIRT052764 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
