HCSGD entry for SSC5D
1. General information
| Official gene symbol | SSC5D |
|---|---|
| Entrez ID | 284297 |
| Gene full name | scavenger receptor cysteine rich domain containing (5 domains) |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005044 | Scavenger receptor activity | IEA | molecular_function |
| GO:0005576 | Extracellular region | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0006952 | Defense response | IEA | biological_process |
| GO:0007275 | Multicellular organismal development | IEA | biological_process |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0045087 | Innate immune response | IEA | biological_process |
| GO:2000482 | Regulation of interleukin-8 secretion | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8771636450 | 0.0922734395 | 0.9999902473 | 0.5785443545 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2463335972 |
| GSE13712_SHEAR | Down | -0.0056552656 |
| GSE13712_STATIC | Down | -0.0972843916 |
| GSE19018 | Up | 0.0057468200 |
| GSE19899_A1 | Down | -0.2494466259 |
| GSE19899_A2 | Up | 0.0019579061 |
| PubMed_21979375_A1 | Down | -1.0198407560 |
| PubMed_21979375_A2 | Down | -0.0023863050 |
| GSE35957 | Down | -0.1736663196 |
| GSE36640 | Up | 0.7303595523 |
| GSE54402 | Down | -0.4028240953 |
| GSE9593 | Up | 0.2218496584 |
| GSE43922 | Down | -0.0484426180 |
| GSE24585 | Up | 0.0111269131 |
| GSE37065 | Down | -0.1486452032 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Down | -0.2997279516 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
