HCSGD entry for C16orf54

1. General information

Official gene symbolC16orf54
Entrez ID283897
Gene full namechromosome 16 open reading frame 54
Other gene symbols
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0016021Integral component of membraneIEAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.27872845640.75388115570.97579158241.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0183351772
GSE13712_SHEARDown-0.0371113520
GSE13712_STATICDown-0.0408927187
GSE19018Up0.2397743153
GSE19899_A1Up0.1033564564
GSE19899_A2Down-0.2904735192
PubMed_21979375_A1Up0.2612958616
PubMed_21979375_A2Up0.0816868487
GSE35957Down-0.0272920191
GSE36640Down-0.0398381301
GSE54402Up0.0793242042
GSE9593Up0.0531244242
GSE43922Up0.0314988587
GSE24585Up0.0580414529
GSE37065Down-0.0646189049
GSE28863_A1Up0.0521851018
GSE28863_A2Down-0.2117088808
GSE28863_A3Up0.3298540088
GSE28863_A4Up0.2888365689
GSE48662Up0.0070535762

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-335-5pMIMAT0000765MIRT017944MicroarrayFunctional MTI (Weak)18185580
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.