HCSGD entry for GXYLT1
1. General information
| Official gene symbol | GXYLT1 |
|---|---|
| Entrez ID | 283464 |
| Gene full name | glucoside xylosyltransferase 1 |
| Other gene symbols | GLT8D3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | TAS | cellular_component |
| GO:0005975 | Carbohydrate metabolic process | TAS | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016266 | O-glycan processing | IDA | biological_process |
| GO:0030203 | Glycosaminoglycan metabolic process | TAS | biological_process |
| GO:0030204 | Chondroitin sulfate metabolic process | TAS | biological_process |
| GO:0035252 | UDP-xylosyltransferase activity | IDA | molecular_function |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1858160784 | 0.3127750769 | 0.8418291946 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1531552731 |
| GSE13712_SHEAR | Up | 0.0166830590 |
| GSE13712_STATIC | Up | 0.2801699657 |
| GSE19018 | Down | -0.6085006953 |
| GSE19899_A1 | Up | 0.0744258264 |
| GSE19899_A2 | Down | -0.7588473726 |
| PubMed_21979375_A1 | Down | -0.6506148352 |
| PubMed_21979375_A2 | Down | -0.2063117880 |
| GSE35957 | Down | -0.0731660075 |
| GSE36640 | Up | 0.3465847811 |
| GSE54402 | Down | -0.1667821119 |
| GSE9593 | Up | 0.1140313039 |
| GSE43922 | Up | 0.0103427276 |
| GSE24585 | Up | 0.5217450505 |
| GSE37065 | Up | 0.0730813212 |
| GSE28863_A1 | Up | 0.2065636426 |
| GSE28863_A2 | Up | 0.6059148100 |
| GSE28863_A3 | Down | -0.4948956092 |
| GSE28863_A4 | Up | 0.3227199488 |
| GSE48662 | Down | -0.0162400538 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018293 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT022844 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-33a-5p | MIMAT0000091 | MIRT028207 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-99a-5p | MIMAT0000097 | MIRT048614 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
