HCSGD entry for GPM6A
1. General information
| Official gene symbol | GPM6A |
|---|---|
| Entrez ID | 2823 |
| Gene full name | glycoprotein M6A |
| Other gene symbols | GPM6 M6A |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001764 | Neuron migration | IDA | biological_process |
| GO:0003407 | Neural retina development | IEA ISS | biological_process |
| GO:0005262 | Calcium channel activity | IEA | molecular_function |
| GO:0005886 | Plasma membrane | IEA ISS | cellular_component |
| GO:0007416 | Synapse assembly | IEA ISS | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0030175 | Filopodium | IEA ISS | cellular_component |
| GO:0043005 | Neuron projection | ISS | cellular_component |
| GO:0043025 | Neuronal cell body | IEA ISS | cellular_component |
| GO:0043197 | Dendritic spine | IEA | cellular_component |
| GO:0044295 | Axonal growth cone | IEA ISS | cellular_component |
| GO:0048812 | Neuron projection morphogenesis | IEA ISS | biological_process |
| GO:0048863 | Stem cell differentiation | IDA | biological_process |
| GO:0051491 | Positive regulation of filopodium assembly | IEA ISS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9007604346 | 0.5360188367 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1025609035 |
| GSE13712_SHEAR | Down | -0.2086933498 |
| GSE13712_STATIC | Down | -0.1338676342 |
| GSE19018 | Up | 0.0703618297 |
| GSE19899_A1 | Up | 0.0909489198 |
| GSE19899_A2 | Down | -0.0895179186 |
| PubMed_21979375_A1 | Down | -0.0530398429 |
| PubMed_21979375_A2 | Down | -0.1188002069 |
| GSE35957 | Up | 0.0048161389 |
| GSE36640 | Down | -0.0684213293 |
| GSE54402 | Down | -0.0745243718 |
| GSE9593 | Down | -0.0078313216 |
| GSE43922 | Down | -0.0227149338 |
| GSE24585 | Down | -0.0962807446 |
| GSE37065 | Up | 0.0042385074 |
| GSE28863_A1 | Down | -0.1068358021 |
| GSE28863_A2 | Up | 0.0152768588 |
| GSE28863_A3 | Up | 0.0624843343 |
| GSE28863_A4 | Up | 0.1363848373 |
| GSE48662 | Up | 0.0269492624 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-106b-5p | MIMAT0000680 | MIRT020434 | Microarray | Functional MTI (Weak) | 17242205 |
| hsa-miR-218-5p | MIMAT0000275 | MIRT024239 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-17-5p | MIMAT0000070 | MIRT050918 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
