HCSGD entry for RBMS3
1. General information
| Official gene symbol | RBMS3 |
|---|---|
| Entrez ID | 27303 |
| Gene full name | RNA binding motif, single stranded interacting protein 3 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000166 | Nucleotide binding | IEA | molecular_function |
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0043231 | Intracellular membrane-bounded organelle | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9742454162 | 0.0001823183 | 0.9999902473 | 0.0245860000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -1.1107645676 |
| GSE13712_SHEAR | Down | -0.2784728844 |
| GSE13712_STATIC | Up | 0.0082585256 |
| GSE19018 | Up | 0.6845650543 |
| GSE19899_A1 | Down | -0.9317589206 |
| GSE19899_A2 | Down | -2.7230028794 |
| PubMed_21979375_A1 | Down | -2.3387796948 |
| PubMed_21979375_A2 | Down | -2.3586447145 |
| GSE35957 | Up | 0.4784042734 |
| GSE36640 | Down | -0.9483088494 |
| GSE54402 | Down | -2.0799345863 |
| GSE9593 | Down | -0.0628624573 |
| GSE43922 | Down | -1.8251938872 |
| GSE24585 | Down | -0.7525711439 |
| GSE37065 | Down | -0.4892766089 |
| GSE28863_A1 | Up | 0.2339054868 |
| GSE28863_A2 | Down | -0.7299434789 |
| GSE28863_A3 | Down | -0.5962993553 |
| GSE28863_A4 | Down | -0.2100749899 |
| GSE48662 | Up | 0.0897605186 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-30a-5p | MIMAT0000087 | MIRT028524 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031699 | Proteomics | Functional MTI (Weak) | 18668040 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
