HCSGD entry for NBEA
1. General information
| Official gene symbol | NBEA |
|---|---|
| Entrez ID | 26960 |
| Gene full name | neurobeachin |
| Other gene symbols | BCL8B LYST2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005802 | Trans-Golgi network | ISS | cellular_component |
| GO:0005829 | Cytosol | ISS | cellular_component |
| GO:0005886 | Plasma membrane | ISS | cellular_component |
| GO:0008104 | Protein localization | IEA | biological_process |
| GO:0012505 | Endomembrane system | ISS | cellular_component |
| GO:0019901 | Protein kinase binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5665215227 | 0.1115666996 | 0.9999902473 | 0.6396312568 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0836257624 |
| GSE13712_SHEAR | Down | -1.3324471039 |
| GSE13712_STATIC | Down | -0.5302676578 |
| GSE19018 | Up | 0.1135846385 |
| GSE19899_A1 | Down | -0.0303255150 |
| GSE19899_A2 | Down | -0.4935405939 |
| PubMed_21979375_A1 | Down | -0.4006026053 |
| PubMed_21979375_A2 | Up | 0.2571467616 |
| GSE35957 | Up | 0.3499158497 |
| GSE36640 | Up | 0.2649517712 |
| GSE54402 | Down | -0.2030462401 |
| GSE9593 | Down | -0.2277785172 |
| GSE43922 | Down | -0.5211478972 |
| GSE24585 | Down | -0.0142906618 |
| GSE37065 | Up | 0.1538122262 |
| GSE28863_A1 | Down | -0.1206644580 |
| GSE28863_A2 | Up | 0.4005452282 |
| GSE28863_A3 | Up | 0.0417283929 |
| GSE28863_A4 | Up | 0.0005215085 |
| GSE48662 | Up | 0.4823016571 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-548b-3p | MIMAT0003254 | MIRT016246 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-335-5p | MIMAT0000765 | MIRT016751 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-9-5p | MIMAT0000441 | MIRT021372 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-128-3p | MIMAT0000424 | MIRT021882 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-21-5p | MIMAT0000076 | MIRT030706 | Microarray | Functional MTI (Weak) | 18591254 |
| hsa-miR-935 | MIMAT0004978 | MIRT036648 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-18a-5p | MIMAT0000072 | MIRT050693 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
