HCSGD entry for GIF
1. General information
| Official gene symbol | GIF |
|---|---|
| Entrez ID | 2694 |
| Gene full name | gastric intrinsic factor (vitamin B synthesis) |
| Other gene symbols | IF IFMH INF TCN3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005576 | Extracellular region | TAS | cellular_component |
| GO:0005615 | Extracellular space | IDA | cellular_component |
| GO:0005768 | Endosome | IDA TAS | cellular_component |
| GO:0005902 | Microvillus | IDA | cellular_component |
| GO:0006766 | Vitamin metabolic process | TAS | biological_process |
| GO:0006767 | Water-soluble vitamin metabolic process | TAS | biological_process |
| GO:0006824 | Cobalt ion transport | IEA | biological_process |
| GO:0009235 | Cobalamin metabolic process | IBA TAS | biological_process |
| GO:0015889 | Cobalamin transport | IMP | biological_process |
| GO:0016324 | Apical plasma membrane | IDA | cellular_component |
| GO:0031419 | Cobalamin binding | IDA | molecular_function |
| GO:0043202 | Lysosomal lumen | TAS | cellular_component |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7487167965 | 0.8159079936 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0290197008 |
| GSE13712_SHEAR | Down | -0.2771089711 |
| GSE13712_STATIC | Up | 0.0306837828 |
| GSE19018 | Down | -0.0891682615 |
| GSE19899_A1 | Up | 0.1075436186 |
| GSE19899_A2 | Up | 0.1934494329 |
| PubMed_21979375_A1 | Up | 0.0682977398 |
| PubMed_21979375_A2 | Up | 0.2352373057 |
| GSE35957 | Up | 0.0044382402 |
| GSE36640 | Up | 0.0913601095 |
| GSE54402 | Up | 0.1064516034 |
| GSE9593 | Up | 0.0770314395 |
| GSE43922 | Up | 0.0157693614 |
| GSE24585 | Down | -0.0209632194 |
| GSE37065 | Down | -0.1169677752 |
| GSE28863_A1 | Down | -0.0213998626 |
| GSE28863_A2 | Up | 0.0600943914 |
| GSE28863_A3 | Up | 0.0463048028 |
| GSE28863_A4 | Up | 0.0462765322 |
| GSE48662 | Down | -0.0452376757 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
