HCSGD entry for NARF
1. General information
| Official gene symbol | NARF |
|---|---|
| Entrez ID | 26502 |
| Gene full name | nuclear prelamin A recognition factor |
| Other gene symbols | IOP2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005521 | Lamin binding | IPI | molecular_function |
| GO:0005638 | Lamin filament | IDA | cellular_component |
| GO:0005652 | Nuclear lamina | TAS | cellular_component |
| GO:0031981 | Nuclear lumen | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0535049808 | 0.9251895407 | 0.5053483513 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2029402659 |
| GSE13712_SHEAR | Down | -0.0913845164 |
| GSE13712_STATIC | Down | -0.0175310926 |
| GSE19018 | Up | 0.0296478921 |
| GSE19899_A1 | Up | 0.4821172394 |
| GSE19899_A2 | Up | 0.1728781549 |
| PubMed_21979375_A1 | Up | 0.2861738688 |
| PubMed_21979375_A2 | Up | 0.1656766816 |
| GSE35957 | Down | -0.3552507437 |
| GSE36640 | Down | -0.4191267490 |
| GSE54402 | Up | 0.5405807367 |
| GSE9593 | Down | -0.1846696381 |
| GSE43922 | Up | 0.4995342479 |
| GSE24585 | Up | 1.1514986420 |
| GSE37065 | Up | 0.0413682957 |
| GSE28863_A1 | Up | 0.1275200071 |
| GSE28863_A2 | Up | 0.0843161329 |
| GSE28863_A3 | Down | -0.0470952506 |
| GSE28863_A4 | Down | -0.0006081852 |
| GSE48662 | Up | 0.0806411825 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-98-5p | MIMAT0000096 | MIRT027539 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-24-3p | MIMAT0000080 | MIRT030389 | Microarray | Functional MTI (Weak) | 19748357 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031638 | Microarray | Functional MTI (Weak) | 21199864 |
| hsa-miR-423-3p | MIMAT0001340 | MIRT042570 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
