HCSGD entry for SLC13A4
1. General information
| Official gene symbol | SLC13A4 |
|---|---|
| Entrez ID | 26266 |
| Gene full name | solute carrier family 13 (sodium/sulfate symporters), member 4 |
| Other gene symbols | SUT-1 SUT1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005886 | Plasma membrane | TAS | cellular_component |
| GO:0005887 | Integral component of plasma membrane | TAS | cellular_component |
| GO:0008272 | Sulfate transport | TAS | biological_process |
| GO:0015382 | Sodium:sulfate symporter activity | TAS | molecular_function |
| GO:0034220 | Ion transmembrane transport | TAS | biological_process |
| GO:0035725 | Sodium ion transmembrane transport | TAS | biological_process |
| GO:0055085 | Transmembrane transport | TAS | biological_process |
| GO:1902358 | Sulfate transmembrane transport | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2927300293 | 0.9182254056 | 0.9929785696 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1551013930 |
| GSE13712_SHEAR | Up | 0.1219609608 |
| GSE13712_STATIC | Up | 0.0046275874 |
| GSE19018 | Up | 0.2511657334 |
| GSE19899_A1 | Up | 0.0589197914 |
| GSE19899_A2 | Down | -0.0027188521 |
| PubMed_21979375_A1 | Up | 0.2011060765 |
| PubMed_21979375_A2 | Up | 0.0431793323 |
| GSE35957 | Down | -0.0829323791 |
| GSE36640 | Down | -0.0752469245 |
| GSE54402 | Down | -0.0275328328 |
| GSE9593 | Up | 0.2692883332 |
| GSE43922 | Up | 0.0238837658 |
| GSE24585 | Up | 0.0246122614 |
| GSE37065 | Up | 0.1768108444 |
| GSE28863_A1 | Down | -0.0615672447 |
| GSE28863_A2 | Up | 0.4735417099 |
| GSE28863_A3 | Up | 0.1539420407 |
| GSE28863_A4 | Up | 0.0573739647 |
| GSE48662 | Down | -0.2143413771 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017301 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029042 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
