HCSGD entry for PITPNC1
1. General information
| Official gene symbol | PITPNC1 |
|---|---|
| Entrez ID | 26207 |
| Gene full name | phosphatidylinositol transfer protein, cytoplasmic 1 |
| Other gene symbols | M-RDGB-beta MRDGBbeta RDGB-BETA RDGBB RDGBB1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005622 | Intracellular | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0006810 | Transport | IEA | biological_process |
| GO:0007165 | Signal transduction | IMP | biological_process |
| GO:0008289 | Lipid binding | IEA | molecular_function |
| GO:0008526 | Phosphatidylinositol transporter activity | IMP | molecular_function |
| GO:0015914 | Phospholipid transport | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0032520269 | 0.8484139128 | 0.1536743268 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3349182716 |
| GSE13712_SHEAR | Up | 0.1629340487 |
| GSE13712_STATIC | Up | 0.1036375667 |
| GSE19018 | Up | 0.1864663364 |
| GSE19899_A1 | Up | 0.6953269250 |
| GSE19899_A2 | Up | 1.6536546383 |
| PubMed_21979375_A1 | Up | 1.7737078162 |
| PubMed_21979375_A2 | Up | 1.5029539560 |
| GSE35957 | Down | -0.8621801293 |
| GSE36640 | Up | 0.2941582671 |
| GSE54402 | Up | 1.0652689605 |
| GSE9593 | Down | -0.5133276696 |
| GSE43922 | Up | 1.8908404862 |
| GSE24585 | Up | 0.3947299806 |
| GSE37065 | Up | 0.6241100397 |
| GSE28863_A1 | Down | -0.3331001068 |
| GSE28863_A2 | Down | -0.1736430255 |
| GSE28863_A3 | Down | -0.1124963207 |
| GSE28863_A4 | Down | -0.0089106706 |
| GSE48662 | Down | -0.2100015226 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-126-3p | MIMAT0000445 | MIRT006544 | ELISA//Flow//Immunohistochemistry//Luciferase reporter assay//Microarray//qRT-PCR//Western blot | Functional MTI | 22170610 |
| hsa-miR-335-5p | MIMAT0000765 | MIRT018806 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-142-3p | MIMAT0000434 | MIRT021552 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-7-5p | MIMAT0000252 | MIRT025935 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026883 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT030173 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
