HCSGD entry for LRIG1
1. General information
| Official gene symbol | LRIG1 |
|---|---|
| Entrez ID | 26018 |
| Gene full name | leucine-rich repeats and immunoglobulin-like domains 1 |
| Other gene symbols | LIG-1 LIG1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2593324266 | 0.1216059230 | 0.9528041318 | 0.6700246028 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0819788964 |
| GSE13712_SHEAR | Down | -0.7225728515 |
| GSE13712_STATIC | Down | -0.5836302349 |
| GSE19018 | Up | 0.1398403770 |
| GSE19899_A1 | Up | 0.1238601225 |
| GSE19899_A2 | Up | 0.3554132563 |
| PubMed_21979375_A1 | Up | 0.2665604353 |
| PubMed_21979375_A2 | Up | 0.1664881836 |
| GSE35957 | Up | 0.0610011694 |
| GSE36640 | Down | -1.3548967000 |
| GSE54402 | Down | -0.2136755747 |
| GSE9593 | Up | 0.0595663948 |
| GSE43922 | Up | 0.4918507477 |
| GSE24585 | Down | -0.2243056961 |
| GSE37065 | Up | 0.5176741388 |
| GSE28863_A1 | Up | 0.3028482303 |
| GSE28863_A2 | Up | 0.7542160642 |
| GSE28863_A3 | Up | 0.1701573950 |
| GSE28863_A4 | Down | -0.2454629575 |
| GSE48662 | Down | -1.0408459592 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT022896 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-215-5p | MIMAT0000272 | MIRT024575 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026719 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-98-5p | MIMAT0000096 | MIRT027745 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-149-5p | MIMAT0000450 | MIRT045526 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049649 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
