HCSGD entry for THUMPD3
1. General information
| Official gene symbol | THUMPD3 |
|---|---|
| Entrez ID | 25917 |
| Gene full name | THUMP domain containing 3 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0008168 | Methyltransferase activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9260467915 | 0.1620171346 | 0.9999902473 | 0.7774754786 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1743803789 |
| GSE13712_SHEAR | Down | -0.0404181544 |
| GSE13712_STATIC | Up | 0.2021029844 |
| GSE19018 | Down | -0.1560893874 |
| GSE19899_A1 | Down | -0.0963868173 |
| GSE19899_A2 | Down | -0.0029549391 |
| PubMed_21979375_A1 | Down | -0.1497895418 |
| PubMed_21979375_A2 | Down | -0.1501032570 |
| GSE35957 | Down | -0.0112506709 |
| GSE36640 | Down | -0.2481483705 |
| GSE54402 | Down | -0.0079202102 |
| GSE9593 | Up | 0.0594807008 |
| GSE43922 | Down | -0.1207341759 |
| GSE24585 | Down | -0.1332941900 |
| GSE37065 | Up | 0.1457063099 |
| GSE28863_A1 | Up | 0.0659667124 |
| GSE28863_A2 | Up | 0.1534315982 |
| GSE28863_A3 | Down | -0.7004778178 |
| GSE28863_A4 | Down | -0.3018823317 |
| GSE48662 | Down | -0.3277333511 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-93-3p | MIMAT0004509 | MIRT038790 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT040410 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-125b-5p | MIMAT0000423 | MIRT045895 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
