HCSGD entry for ZNF473
1. General information
| Official gene symbol | ZNF473 |
|---|---|
| Entrez ID | 25888 |
| Gene full name | zinc finger protein 473 |
| Other gene symbols | HZFP100 ZN473 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005622 | Intracellular | IEA | cellular_component |
| GO:0005654 | Nucleoplasm | TAS | cellular_component |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0006366 | Transcription from RNA polymerase II promoter | TAS | biological_process |
| GO:0006369 | Termination of RNA polymerase II transcription | TAS | biological_process |
| GO:0006398 | Histone mRNA 3'-end processing | IDA | biological_process |
| GO:0008334 | Histone mRNA metabolic process | TAS | biological_process |
| GO:0010467 | Gene expression | TAS | biological_process |
| GO:0015030 | Cajal body | IDA | cellular_component |
| GO:0031124 | MRNA 3'-end processing | TAS | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5243981308 | 0.2422156187 | 0.9999902473 | 0.9478675736 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3326906075 |
| GSE13712_SHEAR | Down | -0.1827887264 |
| GSE13712_STATIC | Down | -0.0947508759 |
| GSE19018 | Down | -0.1534636941 |
| GSE19899_A1 | Up | 0.0042337072 |
| GSE19899_A2 | Down | -0.3005043977 |
| PubMed_21979375_A1 | Up | 0.8000035016 |
| PubMed_21979375_A2 | Up | 0.2529013754 |
| GSE35957 | Down | -0.1967592912 |
| GSE36640 | Down | -0.8066217227 |
| GSE54402 | Up | 0.5681025015 |
| GSE9593 | Up | 0.1703158222 |
| GSE43922 | Up | 0.0090973717 |
| GSE24585 | Down | -0.0636414472 |
| GSE37065 | Up | 0.0205063421 |
| GSE28863_A1 | Down | -0.1951569337 |
| GSE28863_A2 | Up | 0.1232436335 |
| GSE28863_A3 | Down | -0.8513741223 |
| GSE28863_A4 | Up | 0.1264932961 |
| GSE48662 | Down | -0.1774301988 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-98-5p | MIMAT0000096 | MIRT027502 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-877-3p | MIMAT0004950 | MIRT036944 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-378a-3p | MIMAT0000732 | MIRT043880 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
