HCSGD entry for GALNS
1. General information
| Official gene symbol | GALNS |
|---|---|
| Entrez ID | 2588 |
| Gene full name | galactosamine (N-acetyl)-6-sulfate sulfatase |
| Other gene symbols | GALNAC6S GAS GalN6S MPS4A |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003943 | N-acetylgalactosamine-4-sulfatase activity | TAS | molecular_function |
| GO:0005975 | Carbohydrate metabolic process | TAS | biological_process |
| GO:0008484 | Sulfuric ester hydrolase activity | IDA IEA | molecular_function |
| GO:0030203 | Glycosaminoglycan metabolic process | TAS | biological_process |
| GO:0042339 | Keratan sulfate metabolic process | TAS | biological_process |
| GO:0042340 | Keratan sulfate catabolic process | TAS | biological_process |
| GO:0043202 | Lysosomal lumen | TAS | cellular_component |
| GO:0043890 | N-acetylgalactosamine-6-sulfatase activity | IEA | molecular_function |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3253573534 | 0.6073477869 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0953344689 |
| GSE13712_SHEAR | Down | -0.1567097577 |
| GSE13712_STATIC | Down | -0.2701284162 |
| GSE19018 | Up | 0.0528642594 |
| GSE19899_A1 | Down | -0.1852620588 |
| GSE19899_A2 | Up | 0.1812820993 |
| PubMed_21979375_A1 | Down | -0.2485527473 |
| PubMed_21979375_A2 | Up | 0.3338209594 |
| GSE35957 | Down | -0.6119184695 |
| GSE36640 | Up | 0.2101517576 |
| GSE54402 | Down | -0.0448755782 |
| GSE9593 | Up | 0.3903044880 |
| GSE43922 | Up | 0.0514968807 |
| GSE24585 | Up | 0.1580976353 |
| GSE37065 | Down | -0.1499336989 |
| GSE28863_A1 | Up | 0.1706329336 |
| GSE28863_A2 | Up | 0.5234350310 |
| GSE28863_A3 | Up | 0.0945275401 |
| GSE28863_A4 | Down | -0.0363260704 |
| GSE48662 | Up | 0.5198905108 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
