HCSGD entry for B4GALNT1
1. General information
| Official gene symbol | B4GALNT1 |
|---|---|
| Entrez ID | 2583 |
| Gene full name | beta-1,4-N-acetyl-galactosaminyl transferase 1 |
| Other gene symbols | GALGT GALNACT GalNAc-T |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001574 | Ganglioside biosynthetic process | IEA | biological_process |
| GO:0003947 | (N-acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase activity | IEA | molecular_function |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0005975 | Carbohydrate metabolic process | TAS | biological_process |
| GO:0006486 | Protein glycosylation | IEA | biological_process |
| GO:0006687 | Glycosphingolipid metabolic process | TAS | biological_process |
| GO:0007283 | Spermatogenesis | IEA | biological_process |
| GO:0008219 | Cell death | IEA | biological_process |
| GO:0008376 | Acetylgalactosaminyltransferase activity | IEA | molecular_function |
| GO:0016020 | Membrane | TAS | cellular_component |
| GO:0016740 | Transferase activity | IEA | molecular_function |
| GO:0016757 | Transferase activity, transferring glycosyl groups | IEA | molecular_function |
| GO:0019915 | Lipid storage | IEA | biological_process |
| GO:0030173 | Integral component of Golgi membrane | IEA | cellular_component |
| GO:0030259 | Lipid glycosylation | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4507079290 | 0.2096504388 | 0.9999902473 | 0.8847579926 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0031496025 |
| GSE13712_SHEAR | Down | -0.0977947094 |
| GSE13712_STATIC | Up | 0.0035184115 |
| GSE19018 | Up | 0.0184833360 |
| GSE19899_A1 | Down | -0.0179467774 |
| GSE19899_A2 | Down | -0.1845182610 |
| PubMed_21979375_A1 | Down | -0.3929791474 |
| PubMed_21979375_A2 | Down | -0.3649118978 |
| GSE35957 | Down | -0.0262335128 |
| GSE36640 | Up | 1.2126121281 |
| GSE54402 | Up | 0.0291376354 |
| GSE9593 | Down | -0.1277642434 |
| GSE43922 | Down | -0.1969614955 |
| GSE24585 | Up | 0.6673591645 |
| GSE37065 | Down | -0.0206697101 |
| GSE28863_A1 | Down | -0.2077018979 |
| GSE28863_A2 | Up | 0.5818894009 |
| GSE28863_A3 | Down | -0.1474577908 |
| GSE28863_A4 | Down | -0.1644104926 |
| GSE48662 | Down | -0.2815204294 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
