HCSGD entry for CCDC19
1. General information
| Official gene symbol | CCDC19 |
|---|---|
| Entrez ID | 25790 |
| Gene full name | coiled-coil domain containing 19 |
| Other gene symbols | NESG1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | NAS | cellular_component |
| GO:0005739 | Mitochondrion | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0459411117 | 0.8552608905 | 0.4749473684 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1808503830 |
| GSE13712_SHEAR | Down | -0.0352143692 |
| GSE13712_STATIC | Up | 0.3082452293 |
| GSE19018 | Down | -0.0496537645 |
| GSE19899_A1 | Down | -0.0603276609 |
| GSE19899_A2 | Up | 1.3729041408 |
| PubMed_21979375_A1 | Up | 1.8070602778 |
| PubMed_21979375_A2 | Up | 1.3208597229 |
| GSE35957 | Up | 0.0114950623 |
| GSE36640 | Down | -0.2459957814 |
| GSE54402 | Up | 1.2691054843 |
| GSE9593 | Up | 0.0261846302 |
| GSE43922 | Up | 0.1009867127 |
| GSE24585 | Down | -0.0838679411 |
| GSE37065 | Up | 0.0388284586 |
| GSE28863_A1 | Down | -0.0972139782 |
| GSE28863_A2 | Up | 0.0287980428 |
| GSE28863_A3 | Up | 0.1156553029 |
| GSE28863_A4 | Up | 0.1287804489 |
| GSE48662 | Down | -0.2761750357 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-103a-3p | MIMAT0000101 | MIRT027210 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT032074 | Sequencing | Functional MTI (Weak) | 20371350 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
