HCSGD entry for TMCO4
1. General information
| Official gene symbol | TMCO4 |
|---|---|
| Entrez ID | 255104 |
| Gene full name | transmembrane and coiled-coil domains 4 |
| Other gene symbols | RP5-1056L3.6 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9254403176 | 0.0493459139 | 0.9999902473 | 0.4153609850 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0792683037 |
| GSE13712_SHEAR | Down | -0.4973668663 |
| GSE13712_STATIC | Down | -0.3820505477 |
| GSE19018 | Up | 0.0055108184 |
| GSE19899_A1 | Down | -0.2332045152 |
| GSE19899_A2 | Down | -0.0619556201 |
| PubMed_21979375_A1 | Down | -0.6095023667 |
| PubMed_21979375_A2 | Down | -0.2429417900 |
| GSE35957 | Down | -0.0108559058 |
| GSE36640 | Down | -0.1692274489 |
| GSE54402 | Down | -0.7004017407 |
| GSE9593 | Up | 0.0593335377 |
| GSE43922 | Down | -0.6304806836 |
| GSE24585 | Up | 0.0818728389 |
| GSE37065 | Up | 0.0499175431 |
| GSE28863_A1 | Up | 0.0462026605 |
| GSE28863_A2 | Up | 0.1282738226 |
| GSE28863_A3 | Up | 0.0166449255 |
| GSE28863_A4 | Down | -0.0586487871 |
| GSE48662 | Down | -0.0643256040 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-615-3p | MIMAT0003283 | MIRT040301 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
