HCSGD entry for KCTD13
1. General information
| Official gene symbol | KCTD13 |
|---|---|
| Entrez ID | 253980 |
| Gene full name | potassium channel tetramerisation domain containing 13 |
| Other gene symbols | PDIP1 POLDIP1 hBACURD1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004842 | Ubiquitin-protein ligase activity | IDA | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0006260 | DNA replication | ISS | biological_process |
| GO:0016477 | Cell migration | IMP | biological_process |
| GO:0016567 | Protein ubiquitination | IDA | biological_process |
| GO:0017049 | GTP-Rho binding | IDA | molecular_function |
| GO:0019904 | Protein domain specific binding | IEA | molecular_function |
| GO:0031463 | Cul3-RING ubiquitin ligase complex | IDA | cellular_component |
| GO:0035024 | Negative regulation of Rho protein signal transduction | IMP | biological_process |
| GO:0042802 | Identical protein binding | IEA | molecular_function |
| GO:0043149 | Stress fiber assembly | IMP | biological_process |
| GO:0043161 | Proteasome-mediated ubiquitin-dependent protein catabolic process | IDA | biological_process |
| GO:0045740 | Positive regulation of DNA replication | IEA | biological_process |
| GO:0051260 | Protein homooligomerization | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0064468523 | 0.9081251662 | 0.2116718905 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2422464323 |
| GSE13712_SHEAR | Up | 0.1250978948 |
| GSE13712_STATIC | Down | -0.1863333842 |
| GSE19018 | Down | -0.4302658477 |
| GSE19899_A1 | Up | 0.3465912357 |
| GSE19899_A2 | Up | 2.4118690168 |
| PubMed_21979375_A1 | Up | 1.4827915151 |
| PubMed_21979375_A2 | Up | 2.3545739142 |
| GSE35957 | Down | -0.2849646551 |
| GSE36640 | Up | 0.8794698246 |
| GSE54402 | Up | 0.8584978919 |
| GSE9593 | Down | -0.0188467021 |
| GSE43922 | Up | 1.0081079130 |
| GSE24585 | Down | -0.1373098604 |
| GSE37065 | Up | 0.0181400717 |
| GSE28863_A1 | Down | -0.0420660322 |
| GSE28863_A2 | Down | -0.1121019645 |
| GSE28863_A3 | Up | 0.0349581141 |
| GSE28863_A4 | Up | 0.1272993657 |
| GSE48662 | Up | 0.1402831524 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
